Are halophiles chemoheterotrophs?
While Halophiles may be chemoheterotrophs, they're not true chemoautotrophs.
They're still alive because they can take up dissolved H2O and O2, but these substrates aren't utilized by them to make ATP. Instead, these microbes derive energy from organic compounds that they oxidize, or they derive their energy from anaerobic metabolism. They can only live in the presence of oxygen, so they're living in an extreme environment that makes them vulnerable to all the threats to survival that are inherent to living in oxygenated waters: oxidizing chemicals, predation, physical stress. They don't have any ways to keep themselves safe from these things, so they have to put up defenses that make them even more vulnerable. In doing so, their lifestyles tend to be pretty weird.
When are they most active? Like with most biological processes, they can be very different at different times of the day. Generally speaking, they are most active in the night and early morning, when there is more light. If you see Halophiles in an aquarium during daylight hours, you'll likely see them in higher concentrations at night. That's when the temperature starts to drop, and that's when the amount of light gets more limited. In addition, because they need to consume dissolved inorganic compounds, water movement, whether it's from tidal currents or the occasional storm, means they have more contact with dissolved oxygen, so they tend to metabolize more during periods when there's greater flow and mixing of water.
Does domain Archaea include halophiles?
I am trying to get a handle on the relationship between Archaea and Bacteria.
In doing so, I have come across several articles on halophilic bacteria and Archaea. For example, here is an article on the biology of halophilic Archaea. Another article states that, in general, halophiles are most closely related to Archaea, but may have been laterally transferred into the Bacteria. The article then goes on to say that halophiles, which are now classified as Archaea, were first identified in the 1960s, but that it is not clear what they are related to. I am a bit confused, and would like some clarification on the relationship between Archaea and Bacteria.
In general, Halophiles are Archaea, not Bacteria. This is because Halophiles live in very salty environments, where there is high concentration of salts. If these salts were not available, then bacteria would be able to survive in such environments. However, there are many halophiles that also live in fresh water, and so they are Bacteria. There are no known halophiles that live in fresh water.
You will notice that the word Halophile in this context is used to describe the environment, not the organism. It is often used for bacteria that can tolerate very high concentrations of salt, such as Halobacteria, or Bacteria that prefer to live in saline environments.
Are halophiles archaebacteria?
A new genus and species, Halocynobacter lainensis sp.
nov., isolated from an alkaline, hypersaline lake in China are described. Strain HAL-13T grows slowly and is motile by one flagellum. Phylogenetic analysis based on 16S rRNA gene sequences reveals that strain HAL-13T forms a robust clade with the genera Halococcus and Natronomonas, and phylogenetically differs from members of other families of the phylum Bacteroidetes, particularly the genus Aquabacterium. Cells of the novel strain were found to contain phosphatidylethanolamine, cardiolipin, three unidentified phospholipids, and glycolipids, and the polar lipid profile consisted mainly of diglycosyl ceramide and tetrasaccharide monoalkyl glycerol/diacylglycerol.1 mol%. The name Halocynobacter lainensis gen., sp. Is proposed for the type species of this genus; it is classified in the phylum Bacteroidetes of the class Bacteroidia and the order Bacteroidales. The type strain of the new genus is HAL-13T (= KCTC 23109T = CCTCC AB 2001021T). An emended description of the genus Halocynobacter is also presented.
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